biopython by biopython

Official git repository for Biopython (originally converted from CVS)

updated at June 22, 2024, 1:41 p.m.

168 +0

4,222 +3

1,727 +0

scispacy by allenai

A full spaCy pipeline and models for scientific/biomedical documents.

updated at June 22, 2024, 12:09 a.m.

52 +0

1,636 +2

223 +1

BioGPT by Microsoft

None

updated at June 21, 2024, 4:09 p.m.

70 +0

4,249 +3

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scibert by allenai

A BERT model for scientific text.

updated at June 21, 2024, 3:46 p.m.

49 +0

1,460 +4

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biobert by dmis-lab

Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining

updated at June 20, 2024, 11:37 a.m.

63 +0

1,874 +0

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bluebert by ncbi-nlp

BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).

updated at June 19, 2024, 6:19 a.m.

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540 +1

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brat by nlplab

brat rapid annotation tool (brat) - for all your textual annotation needs

updated at June 18, 2024, 1:46 p.m.

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medaCy by NLPatVCU

Medical Text Mining and Information Extraction with spaCy

updated at June 17, 2024, 6:12 p.m.

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clinicalBERT by EmilyAlsentzer

repository for Publicly Available Clinical BERT Embeddings

updated at June 15, 2024, 8:33 a.m.

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634 +0

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BioWordVec by ncbi-nlp

None

updated at June 12, 2024, 9:01 a.m.

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biolink-model by biolink

Schema and generated objects for biolink data model and upper ontology

updated at June 5, 2024, 11:13 a.m.

24 +1

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pubrunner by jakelever

A framework for keeping biomedical text mining result up-to-date

updated at Feb. 26, 2024, 4:56 p.m.

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TabInOut by nikolamilosevic86

Framework for information extraction from tables

updated at July 3, 2023, 7:18 p.m.

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