scispacy by allenai

A full spaCy pipeline and models for scientific/biomedical documents.

updated at Nov. 14, 2024, 5:08 p.m.

Python

52 +0

1,709 +2

228 -1

GitHub
clinicalBERT by EmilyAlsentzer

repository for Publicly Available Clinical BERT Embeddings

updated at Nov. 15, 2024, 6:14 a.m.

Python

25 +0

674 +1

135 +0

GitHub
HumanDiseaseOntology by DiseaseOntology

Repository for the Human Disease Ontology.

updated at Nov. 15, 2024, 4:46 p.m.

Makefile

21 +0

347 +0

108 -1

GitHub
BioGPT by Microsoft

None

updated at Nov. 16, 2024, 11:59 a.m.

Python

71 +0

4,307 +6

452 +0

GitHub
CommonDataModel by OHDSI

Definition and DDLs for the OMOP Common Data Model (CDM)

updated at Nov. 17, 2024, 9:02 a.m.

HTML

124 +0

896 +5

451 +0

GitHub
scibert by allenai

A BERT model for scientific text.

updated at Nov. 17, 2024, 12:20 p.m.

Python

52 +0

1,523 +2

217 +0

GitHub
biobert by dmis-lab

Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining

updated at Nov. 17, 2024, 12:57 p.m.

Python

62 +0

1,954 +7

453 +1

GitHub
mimic-code by MIT-LCP

MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

updated at Nov. 17, 2024, 11:43 p.m.

Jupyter Notebook

135 +0

2,608 +9

1,527 +4

GitHub