Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
created at Jan. 15, 2020, 11:08 p.m.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
created at Nov. 23, 2017, 1:56 a.m.
RNAseq analysis notes from Ming Tang
created at Aug. 26, 2015, 7:37 p.m.
ChIP-seq analysis notes from Ming Tang
created at June 12, 2015, 9:42 p.m.
Easily submitting multiple PBS jobs or running local jobs in parallel. Multiple input files supported.
created at March 9, 2015, 9:40 a.m.
Access to Biological Web Services from Python.
created at Aug. 28, 2014, 3:24 p.m.
Explore and analyze biological sequence data
created at April 27, 2014, 12:34 p.m.
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
created at Feb. 6, 2013, 11:14 a.m.
CGAT-ruffus is a lightweight python module for running computational pipelines
created at Jan. 6, 2013, 10:20 p.m.