Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
updated at May 21, 2024, 9:40 a.m.
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
updated at May 21, 2024, 1:58 p.m.
Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
updated at May 22, 2024, 2:12 a.m.
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
updated at May 22, 2024, 4:17 p.m.
tools for adding mutations to existing .bam files, used for testing mutation callers
updated at May 22, 2024, 10:59 p.m.
RNAseq analysis notes from Ming Tang
updated at May 23, 2024, 7:48 a.m.
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
updated at May 23, 2024, 1:23 p.m.