Automate common sam & bam conversions
updated at Jan. 6, 2016, 2:02 a.m.
CGAT-ruffus is a lightweight python module for running computational pipelines
updated at Dec. 15, 2023, 2:59 a.m.
Easily submitting multiple PBS jobs or running local jobs in parallel. Multiple input files supported.
updated at March 13, 2024, 5:58 a.m.
Explore and analyze biological sequence data
updated at March 17, 2024, 5:55 p.m.
Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")
updated at April 11, 2024, 12:51 a.m.
tools for adding mutations to existing .bam files, used for testing mutation callers
updated at April 23, 2024, 8:44 a.m.
RNAseq analysis notes from Ming Tang
updated at April 27, 2024, 11:05 a.m.
ChIP-seq analysis notes from Ming Tang
updated at April 28, 2024, 6 a.m.
Access to Biological Web Services from Python.
updated at April 28, 2024, 7:28 p.m.