plantcv by danforthcenter

Plant phenotyping with image analysis

created at March 14, 2014, 6:24 p.m.

45 -1

646 +2

263 +0

fiji by fiji

A "batteries-included" distribution of ImageJ

created at April 13, 2011, 10:39 p.m.

52 +0

752 +2

239 +2

CellProfiler by CellProfiler

An open-source application for biological image analysis

created at April 5, 2011, 12:10 p.m.

45 +0

893 +0

377 +2

stardist by stardist

StarDist - Object Detection with Star-convex Shapes

created at June 26, 2018, 7:54 p.m.

26 +0

895 +0

218 +1

imagej2 by imagej

Open scientific N-dimensional image processing

created at Jan. 26, 2012, 6:32 p.m.

93 +0

1,167 +0

332 +1

imagepy by Image-Py

Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy

created at Dec. 29, 2016, 7:35 a.m.

80 +0

1,302 +0

333 +1

cellpose by MouseLand

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

created at Feb. 1, 2020, 10:29 p.m.

29 +0

1,321 +4

380 +2

Slicer by Slicer

Multi-platform, free open source software for visualization and image computing.

created at March 12, 2020, 10:13 p.m.

39 +0

1,648 +10

543 +3

napari by napari

napari: a fast, interactive, multi-dimensional image viewer for python

created at Aug. 13, 2018, 1:12 a.m.

46 +0

2,169 +3

419 +0

scikit-image by scikit-image

Image processing in Python

created at July 7, 2011, 10:07 p.m.

184 +0

6,042 +12

2,223 +4

opencv by opencv

Open Source Computer Vision Library

created at July 19, 2012, 9:40 a.m.

2,654 +1

78,140 +158

55,724 +32