[DEPRECATED] A package for storing morphological profiling data.
created at Jan. 6, 2016, 9 p.m.
DetecDiv provides a comprehensive set of tools to analyze time microscopy images using deep learning methods. The software structure is such that data can be processed either at the command line or using a graphical user-interface. Detecdiv classification models include : image classification and regression, semantic segmentation, LSTM networks to analyze data and image timeseries.
created at March 18, 2020, 1:57 p.m.
XitoSBML - the spatial SBML plugin for ImageJ
created at Nov. 3, 2016, 6:28 a.m.
QuimP is software for tracking cellular shape changes and dynamic distributions of fluorescent reporters at the cell membrane.
created at Jan. 24, 2017, 11:12 a.m.
Analysis of cell migration in Igor Pro
created at Aug. 19, 2015, 12:10 p.m.
Evaluates the fiber orientation and intensity around cells that compact collagen tissue as measure of contractile strength.
created at July 8, 2020, 11:32 a.m.
🔬Python package for high-throughput single-cell imaging analysis.
created at Feb. 21, 2016, 10:25 a.m.
Header-only C++11 library using OpenCV for high-throughput image-based plant phenotyping
created at Nov. 7, 2018, 1:32 p.m.
SALEM^2: Segment Anything in Light and Electron Microscopy via Membrane Guidance
created at Nov. 23, 2023, 3:01 a.m.