QuimP by CellDynamics

QuimP is software for tracking cellular shape changes and dynamic distributions of fluorescent reporters at the cell membrane.

updated at Oct. 14, 2022, 8:09 a.m.

Java

5 +0

6 +0

1 +0

GitHub
ZstackDepthColorCode by UU-cellbiology

Z-stack Depth Colorcode ImageJ FIJI plugin

updated at April 3, 2024, 4:03 a.m.

Java

3 +0

21 +0

6 +0

GitHub
MorphoLibJ by ijpb

Collection of mathematical morphology methods and plugins for ImageJ

updated at April 27, 2024, 1:27 p.m.

Java

18 +0

95 +0

49 +0

GitHub
RS-FISH by PreibischLab

Tool for precise, interactive, fast and scalable FISH spot detection

updated at May 10, 2024, 3:25 a.m.

Java

12 +0

45 +0

13 +0

GitHub
thunderstorm by zitmen

ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging

updated at May 14, 2024, 8:29 a.m.

Java

18 +0

90 +0

42 +0

GitHub
BoneJ2 by bonej-org

Plugins for bone image analysis

updated at May 20, 2024, 10:49 a.m.

Java

7 +0

20 +1

12 +0

GitHub
TrackMate by trackmate-sc

TrackMate is your buddy for your everyday tracking.

updated at May 21, 2024, 3:48 a.m.

Java

21 +0

148 +2

73 +0

GitHub
mia by mianalysis

Modular, object-based analysis for ImageJ/Fiji

updated at May 24, 2024, 3:43 p.m.

Java

2 +0

11 +0

2 +0

GitHub
imagej2 by imagej

Open scientific N-dimensional image processing microscope sparkler

updated at May 25, 2024, 1:03 a.m.

Java

92 +0

1,110 +4

328 +1

GitHub
ImageJ by imagej

Public domain software for processing and analyzing scientific images

updated at May 25, 2024, 6:48 a.m.

Java

48 +0

491 +7

210 +0

GitHub
Trainable_Segmentation by fiji

Fiji library to perform image segmentation based on the Weka learning schemes

updated at May 25, 2024, 5:02 p.m.

Java

24 +0

105 +2

60 +0

GitHub