An open-source application for biological image analysis
created at April 5, 2011, 12:10 p.m.
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
created at Nov. 10, 2011, 6:57 p.m.
Plant phenotyping with image analysis
created at March 14, 2014, 6:24 p.m.
Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.
created at Sept. 9, 2014, 10:56 p.m.
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
created at Aug. 6, 2015, 1:58 p.m.
A package for storing morphological profiling data.
created at Jan. 6, 2016, 9 p.m.
🔬Python package for high-throughput single-cell imaging analysis.
created at Feb. 21, 2016, 10:25 a.m.
Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
created at July 1, 2016, 6:49 a.m.
python functions for simulating optical transfer functions
created at Sept. 21, 2016, 3:02 p.m.
Axon/Myelin segmentation using Deep Learning
created at Sept. 26, 2016, 2:20 p.m.
A collection of tools for painting super-resolution images
created at Oct. 27, 2016, 8:13 a.m.
Pure Python library for reading NIS Elements ND2 images and metadata
created at Feb. 14, 2017, 3:47 p.m.
Single-cell fluorescence microscopy data analysis
created at May 30, 2017, 12:26 p.m.