Pure Python library for reading NIS Elements ND2 images and metadata
updated at May 15, 2023, 3:46 p.m.
Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.
updated at June 8, 2023, 10:11 a.m.
Single-cell fluorescence microscopy data analysis
updated at Feb. 13, 2024, 6:15 a.m.
Evaluates the fiber orientation and intensity around cells that compact collagen tissue as measure of contractile strength.
updated at Feb. 26, 2024, 8:34 a.m.
Lattice light-sheet post-processing utility.
updated at March 1, 2024, 12:27 p.m.
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
updated at March 26, 2024, 10:54 a.m.
Gaussian processes and Bayesian optimization for images and hyperspectral data
updated at April 4, 2024, 11:01 a.m.
HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.
updated at April 15, 2024, 8:54 a.m.
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
updated at April 17, 2024, 10:39 p.m.
Efficient cell detection in large images using cellfinder in napari
updated at April 18, 2024, 10:17 p.m.
A package for storing morphological profiling data.
updated at April 28, 2024, 11:11 a.m.
🔬Python package for high-throughput single-cell imaging analysis.
updated at April 29, 2024, 2:06 p.m.
Axon/Myelin segmentation using Deep Learning
updated at May 2, 2024, 3:07 p.m.
Multiple file format reading directly into napari using pure Python
updated at May 3, 2024, 3:26 p.m.