Axon/Myelin segmentation using Deep Learning
created at Sept. 26, 2016, 2:20 p.m.
Read and write Neuroglancer datasets programmatically.
created at July 25, 2017, 5:34 p.m.
Automated 3D brain registration in napari with support for multiple species and atlases.
created at July 2, 2021, 2:11 p.m.
HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.
created at May 5, 2021, 3:38 p.m.
An open-source application for biological image analysis
created at April 5, 2011, 12:10 p.m.
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
created at Aug. 6, 2015, 1:58 p.m.
Multiple file format reading directly into napari using pure Python
created at March 20, 2020, 5:52 p.m.
Single-cell fluorescence microscopy data analysis
created at May 30, 2017, 12:26 p.m.
Image quality is an open source software library for Image Quality Assessment (IQA).
created at July 6, 2019, 4:28 p.m.
A lightweight python module to interact with atlases for systems neuroscience
created at April 30, 2020, 11:10 a.m.
Accurate and efficient spot detection for microscopy data
created at Feb. 2, 2024, 5:28 p.m.
🔬Python package for high-throughput single-cell imaging analysis.
created at Feb. 21, 2016, 10:25 a.m.