plantcv by danforthcenter

Plant phenotyping with image analysis

created at March 14, 2014, 6:24 p.m.

46 +0

621 +0

257 +0

CaImAn by flatironinstitute

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

created at Aug. 6, 2015, 1:58 p.m.

47 +0

610 +0

356 +0

ImageJ by imagej

Public domain software for processing and analyzing scientific images

created at Aug. 1, 2011, 12:29 p.m.

48 +0

498 +2

212 +1

napari by napari

napari: a fast, interactive, multi-dimensional image viewer for python

created at Aug. 13, 2018, 1:12 a.m.

48 +0

2,096 +10

410 -1

fiji by fiji

A "batteries-included" distribution of ImageJ

created at April 13, 2011, 10:39 p.m.

50 +0

721 +2

231 +0

imagepy by Image-Py

Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy

created at Dec. 29, 2016, 7:35 a.m.

81 +0

1,288 +0

328 -1

imagej2 by imagej

Open scientific N-dimensional image processing

created at Jan. 26, 2012, 6:32 p.m.

92 +0

1,117 +5

328 +0

scikit-image by scikit-image

Image processing in Python

created at July 7, 2011, 10:07 p.m.

187 +1

5,916 +9

2,207 +0

opencv by opencv

Open Source Computer Vision Library

created at July 19, 2012, 9:40 a.m.

2,655 -3

76,397 +153

55,636 +11