Automated 3D brain registration with support for multiple species and atlases.
created at May 26, 2020, 2:36 p.m.
Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
created at Dec. 26, 2018, 1:51 a.m.
RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
created at April 16, 2020, 12:11 a.m.
Efficient cell detection in large images using cellfinder in napari
created at Jan. 22, 2021, 1:21 p.m.
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
created at Feb. 12, 2020, 9:18 a.m.
Image classification of Fungus using ResNet
created at Oct. 14, 2019, 4:50 a.m.
Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.
created at Sept. 9, 2014, 10:56 p.m.
Tool for precise, interactive, fast and scalable FISH spot detection
created at Oct. 4, 2017, 5:01 p.m.
Noise Correction Algorithm for sCMOS cameras
created at July 10, 2017, 7:26 p.m.
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
created at Nov. 10, 2011, 6:57 p.m.
Deep Learning Library for Single Cell Analysis
created at May 16, 2018, 5:41 p.m.
⚡ Open-source software for deep learning-based digital pathology
created at July 9, 2019, 12:28 p.m.