RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
created at April 16, 2020, 12:11 a.m.
PAthological QUpath Obsession - QuPath and Python conversations
created at July 6, 2020, 12:21 p.m.
Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
created at July 1, 2016, 6:49 a.m.
Tool for precise, interactive, fast and scalable FISH spot detection
created at Oct. 4, 2017, 5:01 p.m.
python functions for simulating optical transfer functions
created at Sept. 21, 2016, 3:02 p.m.
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
created at Dec. 16, 2019, 7:39 p.m.
[DEPRECATED] A package for storing morphological profiling data.
created at Jan. 6, 2016, 9 p.m.
Image classification of Fungus using ResNet
created at Oct. 14, 2019, 4:50 a.m.
Multiple file format reading directly into napari using pure Python
created at March 20, 2020, 5:52 p.m.
Noise Correction Algorithm for sCMOS cameras
created at July 10, 2017, 7:26 p.m.
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
created at April 10, 2023, 8:42 p.m.
Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.
created at Feb. 9, 2021, 2:57 a.m.
A versatile, fully open-source pipeline to extract phenotypic measurements from plant images
created at Feb. 13, 2020, 3 p.m.
Single-cell fluorescence microscopy data analysis
created at May 30, 2017, 12:26 p.m.