Evaluates the fiber orientation and intensity around cells that compact collagen tissue as measure of contractile strength.
created at July 8, 2020, 11:32 a.m.
Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.
created at Aug. 10, 2021, 9:41 a.m.
Modular, object-based analysis for ImageJ/Fiji
created at March 16, 2018, 11:43 a.m.
#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720
created at Aug. 10, 2020, 1:59 p.m.
🔬Python package for high-throughput single-cell imaging analysis.
created at Feb. 21, 2016, 10:25 a.m.
Header-only C++11 library using OpenCV for high-throughput image-based plant phenotyping
created at Nov. 7, 2018, 1:32 p.m.
HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.
created at May 5, 2021, 3:38 p.m.
A package for storing morphological profiling data.
created at Jan. 6, 2016, 9 p.m.
Accurate and efficient spot detection for microscopy data
created at Feb. 2, 2024, 5:28 p.m.
Z-stack Depth Colorcode ImageJ FIJI plugin
created at Jan. 11, 2021, 3:31 p.m.
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
created at April 10, 2023, 8:42 p.m.