brainrender in hallvaaw/awesome-biological-image-analysis

A Python package to visualise neuroanatomical data in atlas space

created at Sept. 19, 2019, 9:27 a.m.

Python

17 +0

553 +1

80 +0

GitHub
cellfinder in hallvaaw/awesome-biological-image-analysis

Automated 3D cell detection in very large images

created at Jan. 17, 2020, 2:14 p.m.

Python

15 +0

181 +0

39 +0

GitHub
brainglobe-atlasapi in hallvaaw/awesome-biological-image-analysis

A Python interface to access neuroanatomical atlases

created at April 30, 2020, 11:10 a.m.

Python

9 +0

128 +0

34 +0

GitHub
brainreg in hallvaaw/awesome-biological-image-analysis

Automated 3D brain registration with support for multiple species and atlases.

created at May 26, 2020, 2:36 p.m.

Python

9 +0

124 +0

29 +0

GitHub
cellfinder-napari in hallvaaw/awesome-biological-image-analysis

Efficient cell detection in large images using cellfinder in napari

created at Jan. 22, 2021, 1:21 p.m.

Python

4 +0

23 +0

6 +0

GitHub
brainreg-napari in hallvaaw/awesome-biological-image-analysis

Automated 3D brain registration in napari with support for multiple species and atlases.

created at July 2, 2021, 2:11 p.m.

Python

5 +0

15 +0

6 +0

GitHub